Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 AC092364.2-201ENST00000596710 2692 ntBASIC18.66■□□□□ 0.58
UBXN1Q04323 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.66■□□□□ 0.58
UBXN1Q04323 NUS1P1-201ENST00000446295 882 ntBASIC18.66■□□□□ 0.58
UBXN1Q04323 TOB2P1-201ENST00000469761 992 ntBASIC18.66■□□□□ 0.58
UBXN1Q04323 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.66■□□□□ 0.58
UBXN1Q04323 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.66■□□□□ 0.58
UBXN1Q04323 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.66■□□□□ 0.58
UBXN1Q04323 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBXN1Q04323 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.66■□□□□ 0.58
UBXN1Q04323 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.66■□□□□ 0.58
UBXN1Q04323 AC116407.4-201ENST00000623319 1061 ntBASIC18.66■□□□□ 0.58
UBXN1Q04323 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.66■□□□□ 0.58
UBXN1Q04323 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBXN1Q04323 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.66■□□□□ 0.58
UBXN1Q04323 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBXN1Q04323 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.65■□□□□ 0.58
UBXN1Q04323 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBXN1Q04323 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
UBXN1Q04323 AL020989.1-201ENST00000422979 469 ntBASIC18.65■□□□□ 0.58
UBXN1Q04323 ACTG1P4-201ENST00000425123 1122 ntBASIC18.65■□□□□ 0.58
UBXN1Q04323 AP002383.4-201ENST00000442518 975 ntBASIC18.65■□□□□ 0.58
UBXN1Q04323 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.65■□□□□ 0.58
UBXN1Q04323 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.65■□□□□ 0.58
UBXN1Q04323 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.65■□□□□ 0.58
UBXN1Q04323 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 AP002414.4-201ENST00000589764 1148 ntBASIC18.65■□□□□ 0.58
UBXN1Q04323 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.65■□□□□ 0.58
UBXN1Q04323 AC026691.1-201ENST00000602502 2017 ntBASIC18.65■□□□□ 0.58
UBXN1Q04323 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
UBXN1Q04323 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.65■□□□□ 0.58
UBXN1Q04323 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.65■□□□□ 0.58
UBXN1Q04323 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBXN1Q04323 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBXN1Q04323 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBXN1Q04323 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.64■□□□□ 0.58
UBXN1Q04323 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBXN1Q04323 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBXN1Q04323 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBXN1Q04323 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBXN1Q04323 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBXN1Q04323 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBXN1Q04323 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBXN1Q04323 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBXN1Q04323 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
UBXN1Q04323 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBXN1Q04323 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
UBXN1Q04323 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
UBXN1Q04323 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.64■□□□□ 0.57
UBXN1Q04323 IGHV3-47-201ENST00000425060 335 ntBASIC18.64■□□□□ 0.57
UBXN1Q04323 KRT18P21-201ENST00000515767 1272 ntBASIC18.64■□□□□ 0.57
UBXN1Q04323 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.64■□□□□ 0.57
UBXN1Q04323 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBXN1Q04323 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.64■□□□□ 0.57
UBXN1Q04323 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.64■□□□□ 0.57
UBXN1Q04323 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.64■□□□□ 0.57
UBXN1Q04323 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBXN1Q04323 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.64■□□□□ 0.57
UBXN1Q04323 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBXN1Q04323 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBXN1Q04323 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.63■□□□□ 0.57
UBXN1Q04323 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBXN1Q04323 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBXN1Q04323 AL391005.1-201ENST00000623953 2435 ntBASIC18.63■□□□□ 0.57
UBXN1Q04323 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBXN1Q04323 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBXN1Q04323 CYP2T1P-202ENST00000641596 2535 ntBASIC18.63■□□□□ 0.57
UBXN1Q04323 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms