Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRA2BP62995 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRA2BP62995 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRA2BP62995 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.03■□□□□ 0.16
TRA2BP62995 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.03■□□□□ 0.16
TRA2BP62995 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRA2BP62995 AC129492.6-201ENST00000611383 1305 ntBASIC16.02■□□□□ 0.16
TRA2BP62995 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.02■□□□□ 0.16
TRA2BP62995 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRA2BP62995 SLC25A6P2-201ENST00000497974 877 ntBASIC16.02■□□□□ 0.16
TRA2BP62995 IGHV3-65-201ENST00000523210 341 ntBASIC16.02■□□□□ 0.16
TRA2BP62995 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.02■□□□□ 0.16
TRA2BP62995 MPDU1-223ENST00000582151 728 ntBASIC16.02■□□□□ 0.16
TRA2BP62995 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.02■□□□□ 0.16
TRA2BP62995 AL356488.2-201ENST00000602755 427 ntBASIC16.02■□□□□ 0.16
TRA2BP62995 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TRA2BP62995 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRA2BP62995 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRA2BP62995 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.02■□□□□ 0.15
TRA2BP62995 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRA2BP62995 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRA2BP62995 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRA2BP62995 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.02■□□□□ 0.15
TRA2BP62995 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.01■□□□□ 0.15
TRA2BP62995 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 AC006538.1-201ENST00000567905 1585 ntBASIC16.01■□□□□ 0.15
TRA2BP62995 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRA2BP62995 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 HNRNPDP1-201ENST00000439535 754 ntBASIC16.01■□□□□ 0.15
TRA2BP62995 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.01■□□□□ 0.15
TRA2BP62995 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 KRT126P-201ENST00000549467 1181 ntBASIC16.01■□□□□ 0.15
TRA2BP62995 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.01■□□□□ 0.15
TRA2BP62995 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.01■□□□□ 0.15
TRA2BP62995 AC005593.1-201ENST00000624894 515 ntBASIC16.01■□□□□ 0.15
TRA2BP62995 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
TRA2BP62995 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRA2BP62995 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 AL603756.1-201ENST00000606511 2163 ntBASIC16■□□□□ 0.15
TRA2BP62995 PC-204ENST00000524491 1714 ntTSL 2 BASIC16■□□□□ 0.15
TRA2BP62995 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16■□□□□ 0.15
TRA2BP62995 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRA2BP62995 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TRA2BP62995 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRA2BP62995 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 HLA-A-202ENST00000376806 1854 ntBASIC16■□□□□ 0.15
TRA2BP62995 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16■□□□□ 0.15
TRA2BP62995 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRA2BP62995 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRA2BP62995 AC079781.3-201ENST00000449110 356 ntBASIC16■□□□□ 0.15
TRA2BP62995 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms