Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
MMP13P45452 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP13P45452 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP13P45452 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MMP13P45452 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP13P45452 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP13P45452 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
MMP13P45452 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
MMP13P45452 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.71■□□□□ 0.43
MMP13P45452 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.71■□□□□ 0.43
MMP13P45452 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP13P45452 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP13P45452 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.71■□□□□ 0.43
MMP13P45452 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP13P45452 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP13P45452 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.71■□□□□ 0.42
MMP13P45452 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
MMP13P45452 AC022188.1-201ENST00000620960 1664 ntBASIC17.71■□□□□ 0.42
MMP13P45452 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
MMP13P45452 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
MMP13P45452 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
MMP13P45452 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 SLC25A1P3-201ENST00000395415 828 ntBASIC17.7■□□□□ 0.42
MMP13P45452 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
MMP13P45452 FGFR3P6-201ENST00000457012 610 ntBASIC17.7■□□□□ 0.42
MMP13P45452 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 AF238378.1-201ENST00000526806 358 ntBASIC17.7■□□□□ 0.42
MMP13P45452 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 KRT126P-201ENST00000549467 1181 ntBASIC17.7■□□□□ 0.42
MMP13P45452 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.7■□□□□ 0.42
MMP13P45452 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.7■□□□□ 0.42
MMP13P45452 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.7■□□□□ 0.42
MMP13P45452 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.7■□□□□ 0.42
MMP13P45452 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 AL139288.1-201ENST00000623748 933 ntBASIC17.7■□□□□ 0.42
MMP13P45452 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MMP13P45452 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 AC092053.1-201ENST00000605787 1936 ntBASIC17.7■□□□□ 0.42
MMP13P45452 AL356309.3-201ENST00000624132 1934 ntBASIC17.7■□□□□ 0.42
MMP13P45452 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP13P45452 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MMP13P45452 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
MMP13P45452 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.69■□□□□ 0.42
MMP13P45452 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms