Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-1P43699 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-1P43699 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-1P43699 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-1P43699 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-1P43699 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-1P43699 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX2-1P43699 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX2-1P43699 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-1P43699 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX2-1P43699 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX2-1P43699 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX2-1P43699 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NKX2-1P43699 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.97□□□□□ -0.17
NKX2-1P43699 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
NKX2-1P43699 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-1P43699 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-1P43699 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 AL391256.1-201ENST00000443260 1855 ntBASIC13.97□□□□□ -0.17
NKX2-1P43699 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-1P43699 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-1P43699 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.96□□□□□ -0.17
NKX2-1P43699 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 AC024909.3-201ENST00000611513 2257 ntBASIC13.96□□□□□ -0.17
NKX2-1P43699 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
NKX2-1P43699 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
NKX2-1P43699 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX2-1P43699 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX2-1P43699 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
NKX2-1P43699 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX2-1P43699 AC109462.3-201ENST00000573934 613 ntBASIC13.96□□□□□ -0.17
NKX2-1P43699 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-1P43699 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-1P43699 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-1P43699 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-1P43699 MST1L-201ENST00000442552 2185 ntBASIC13.96□□□□□ -0.18
NKX2-1P43699 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.96□□□□□ -0.18
NKX2-1P43699 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-1P43699 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.96□□□□□ -0.18
NKX2-1P43699 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-1P43699 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
NKX2-1P43699 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-1P43699 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-1P43699 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-1P43699 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms