Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 ARMC10P1-201ENST00000313754 855 ntBASIC17.79■□□□□ 0.44
SLC1A1P43005 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC1A1P43005 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC1A1P43005 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 NKAPP1-205ENST00000585790 367 ntBASIC17.79■□□□□ 0.44
SLC1A1P43005 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.79■□□□□ 0.44
SLC1A1P43005 AL589182.2-201ENST00000619332 1049 ntBASIC17.79■□□□□ 0.44
SLC1A1P43005 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC1A1P43005 CYP2T1P-202ENST00000641596 2535 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A1P43005 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 AL356309.3-201ENST00000624132 1934 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 AC018695.7-201ENST00000624587 2492 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 CROCCP1-201ENST00000426910 5675 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A1P43005 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A1P43005 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A1P43005 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A1P43005 FOSL1P1-201ENST00000511041 816 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 AC064862.7-201ENST00000604520 867 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A1P43005 AL445228.2-201ENST00000605589 952 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 AC006277.1-201ENST00000624348 1610 ntBASIC17.78■□□□□ 0.44
SLC1A1P43005 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A1P43005 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A1P43005 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A1P43005 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC1A1P43005 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC1A1P43005 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A1P43005 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.77■□□□□ 0.44
SLC1A1P43005 AL139424.1-201ENST00000607572 797 ntBASIC17.77■□□□□ 0.44
SLC1A1P43005 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A1P43005 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A1P43005 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A1P43005 AC093458.2-201ENST00000623150 629 ntBASIC17.77■□□□□ 0.44
SLC1A1P43005 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A1P43005 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A1P43005 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A1P43005 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLC1A1P43005 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms