Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC002056.1-201ENST00000395613 760 ntBASIC18.7■□□□□ 0.58
RFC5P40937 AC211486.1-202ENST00000416371 468 ntBASIC18.7■□□□□ 0.58
RFC5P40937 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC5P40937 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RFC5P40937 AC211476.1-201ENST00000503899 468 ntBASIC18.7■□□□□ 0.58
RFC5P40937 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC5P40937 AC087641.1-201ENST00000557561 1021 ntBASIC18.7■□□□□ 0.58
RFC5P40937 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC5P40937 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
RFC5P40937 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC5P40937 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC5P40937 AC134684.3-201ENST00000641758 218 ntBASIC18.7■□□□□ 0.58
RFC5P40937 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC5P40937 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC5P40937 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC5P40937 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RFC5P40937 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
RFC5P40937 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC5P40937 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RFC5P40937 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 AC131009.4-201ENST00000624048 1740 ntBASIC18.69■□□□□ 0.58
RFC5P40937 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC5P40937 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC5P40937 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.69■□□□□ 0.58
RFC5P40937 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 AC092902.6-201ENST00000641783 218 ntBASIC18.69■□□□□ 0.58
RFC5P40937 AC079781.4-201ENST00000641908 219 ntBASIC18.69■□□□□ 0.58
RFC5P40937 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC5P40937 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFC5P40937 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC5P40937 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RFC5P40937 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 AP006288.1-201ENST00000446065 395 ntBASIC18.68■□□□□ 0.58
RFC5P40937 CEND1P1-201ENST00000451006 455 ntBASIC18.68■□□□□ 0.58
RFC5P40937 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.68■□□□□ 0.58
RFC5P40937 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
RFC5P40937 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.68■□□□□ 0.58
RFC5P40937 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
RFC5P40937 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.68■□□□□ 0.58
RFC5P40937 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.68■□□□□ 0.58
RFC5P40937 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC5P40937 AC108860.2-201ENST00000562760 2183 ntBASIC18.68■□□□□ 0.58
RFC5P40937 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.68■□□□□ 0.58
RFC5P40937 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.68■□□□□ 0.58
RFC5P40937 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.68■□□□□ 0.58
RFC5P40937 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFC5P40937 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms