Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RPA3P35244 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 HYMAI-201ENST00000635591 3347 ntBASIC17.23■□□□□ 0.35
RPA3P35244 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RPA3P35244 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RPA3P35244 AC104819.1-201ENST00000504587 486 ntBASIC17.22■□□□□ 0.35
RPA3P35244 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.22■□□□□ 0.35
RPA3P35244 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.22■□□□□ 0.35
RPA3P35244 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.22■□□□□ 0.35
RPA3P35244 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.22■□□□□ 0.35
RPA3P35244 AC074051.2-201ENST00000565115 352 ntBASIC17.22■□□□□ 0.35
RPA3P35244 AC109462.3-201ENST00000573934 613 ntBASIC17.22■□□□□ 0.35
RPA3P35244 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPA3P35244 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RPA3P35244 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.22■□□□□ 0.35
RPA3P35244 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RPA3P35244 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RPA3P35244 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPA3P35244 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 HLA-A-202ENST00000376806 1854 ntBASIC17.21■□□□□ 0.35
RPA3P35244 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.21■□□□□ 0.35
RPA3P35244 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.21■□□□□ 0.35
RPA3P35244 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.21■□□□□ 0.35
RPA3P35244 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 KRT17P6-201ENST00000453795 1220 ntBASIC17.21■□□□□ 0.35
RPA3P35244 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 AC091607.1-201ENST00000490318 1060 ntBASIC17.21■□□□□ 0.35
RPA3P35244 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.21■□□□□ 0.35
RPA3P35244 IGHV3-52-201ENST00000519770 353 ntBASIC17.21■□□□□ 0.35
RPA3P35244 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
RPA3P35244 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.21■□□□□ 0.35
RPA3P35244 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.21■□□□□ 0.35
RPA3P35244 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.21■□□□□ 0.35
RPA3P35244 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.21■□□□□ 0.35
RPA3P35244 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPA3P35244 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPA3P35244 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPA3P35244 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPA3P35244 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.2■□□□□ 0.34
RPA3P35244 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RPA3P35244 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RPA3P35244 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPA3P35244 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.2■□□□□ 0.34
RPA3P35244 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.2■□□□□ 0.34
RPA3P35244 AC012615.1-201ENST00000565797 1299 ntBASIC17.2■□□□□ 0.34
RPA3P35244 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.2■□□□□ 0.34
RPA3P35244 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.2■□□□□ 0.34
RPA3P35244 AP005901.3-202ENST00000581653 237 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms