Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.68■■□□□ 1.22
USP6P35125 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.68■■□□□ 1.22
USP6P35125 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.68■■□□□ 1.22
USP6P35125 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
USP6P35125 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.68■■□□□ 1.22
USP6P35125 AC025048.6-201ENST00000634326 1161 ntBASIC22.68■■□□□ 1.22
USP6P35125 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
USP6P35125 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.68■■□□□ 1.22
USP6P35125 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP6P35125 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP6P35125 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC22.68■■□□□ 1.22
USP6P35125 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.68■■□□□ 1.22
USP6P35125 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC22.68■■□□□ 1.22
USP6P35125 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
USP6P35125 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.68■■□□□ 1.22
USP6P35125 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.68■■□□□ 1.22
USP6P35125 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC22.68■■□□□ 1.22
USP6P35125 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 AC092053.1-201ENST00000605787 1936 ntBASIC22.67■■□□□ 1.22
USP6P35125 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC22.67■■□□□ 1.22
USP6P35125 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.67■■□□□ 1.22
USP6P35125 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC22.67■■□□□ 1.22
USP6P35125 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 AC006277.1-201ENST00000624348 1610 ntBASIC22.67■■□□□ 1.22
USP6P35125 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
USP6P35125 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.67■■□□□ 1.22
USP6P35125 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.67■■□□□ 1.22
USP6P35125 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP6P35125 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.67■■□□□ 1.22
USP6P35125 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC22.66■■□□□ 1.22
USP6P35125 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.66■■□□□ 1.22
USP6P35125 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
USP6P35125 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.66■■□□□ 1.22
USP6P35125 AL080243.2-201ENST00000418783 582 ntBASIC22.66■■□□□ 1.22
USP6P35125 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 COQ6-210ENST00000554920 649 ntTSL 3 BASIC22.66■■□□□ 1.22
USP6P35125 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.66■■□□□ 1.22
USP6P35125 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
USP6P35125 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
USP6P35125 AL035456.1-201ENST00000456064 1369 ntBASIC22.66■■□□□ 1.22
USP6P35125 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.66■■□□□ 1.22
USP6P35125 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP6P35125 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.65■■□□□ 1.22
USP6P35125 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
USP6P35125 AL662799.1-202ENST00000614205 422 ntBASIC22.65■■□□□ 1.22
USP6P35125 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.65■■□□□ 1.22
USP6P35125 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.65■■□□□ 1.22
USP6P35125 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC22.65■■□□□ 1.22
USP6P35125 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
USP6P35125 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.65■■□□□ 1.22
USP6P35125 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.65■■□□□ 1.22
USP6P35125 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC22.65■■□□□ 1.22
USP6P35125 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
USP6P35125 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 PIN1P1-201ENST00000412108 996 ntBASIC22.65■■□□□ 1.22
USP6P35125 COX5BP8-201ENST00000416911 349 ntBASIC22.65■■□□□ 1.22
USP6P35125 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC22.65■■□□□ 1.22
USP6P35125 AL353705.2-201ENST00000428243 662 ntBASIC22.65■■□□□ 1.22
USP6P35125 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
USP6P35125 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.65■■□□□ 1.22
USP6P35125 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.65■■□□□ 1.22
USP6P35125 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.65■■□□□ 1.22
USP6P35125 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP6P35125 AC008738.7-201ENST00000609744 511 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms