Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.3■□□□□ 0.52
SYN1P17600 AC044860.1-202ENST00000559481 777 ntBASIC18.3■□□□□ 0.52
SYN1P17600 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.3■□□□□ 0.52
SYN1P17600 AC073389.1-201ENST00000595595 795 ntBASIC18.3■□□□□ 0.52
SYN1P17600 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYN1P17600 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.3■□□□□ 0.52
SYN1P17600 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.3■□□□□ 0.52
SYN1P17600 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SYN1P17600 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
SYN1P17600 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SYN1P17600 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SYN1P17600 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 AL080243.2-201ENST00000418783 582 ntBASIC18.29■□□□□ 0.52
SYN1P17600 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.29■□□□□ 0.52
SYN1P17600 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.29■□□□□ 0.52
SYN1P17600 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SYN1P17600 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 AC104989.1-201ENST00000519711 778 ntBASIC18.29■□□□□ 0.52
SYN1P17600 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.29■□□□□ 0.52
SYN1P17600 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 AC105021.1-202ENST00000570572 669 ntBASIC18.29■□□□□ 0.52
SYN1P17600 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.29■□□□□ 0.52
SYN1P17600 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.29■□□□□ 0.52
SYN1P17600 MIR6869-201ENST00000619434 62 ntBASIC18.29■□□□□ 0.52
SYN1P17600 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.29■□□□□ 0.52
SYN1P17600 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
SYN1P17600 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.29■□□□□ 0.52
SYN1P17600 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SYN1P17600 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.29■□□□□ 0.52
SYN1P17600 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYN1P17600 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SYN1P17600 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.28■□□□□ 0.52
SYN1P17600 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.28■□□□□ 0.52
SYN1P17600 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.28■□□□□ 0.52
SYN1P17600 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SYN1P17600 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.28■□□□□ 0.52
SYN1P17600 MIR1908-201ENST00000410394 80 ntBASIC18.28■□□□□ 0.52
SYN1P17600 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.28■□□□□ 0.52
SYN1P17600 RN7SL618P-201ENST00000477850 296 ntBASIC18.28■□□□□ 0.52
SYN1P17600 ELK1P1-201ENST00000485699 580 ntBASIC18.28■□□□□ 0.52
SYN1P17600 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.28■□□□□ 0.52
SYN1P17600 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.28■□□□□ 0.52
SYN1P17600 AC055876.2-201ENST00000531834 546 ntBASIC18.28■□□□□ 0.52
SYN1P17600 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.28■□□□□ 0.52
SYN1P17600 BANF1P1-201ENST00000553684 263 ntBASIC18.28■□□□□ 0.52
SYN1P17600 AL079307.3-201ENST00000556114 283 ntBASIC18.28■□□□□ 0.52
SYN1P17600 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.28■□□□□ 0.52
SYN1P17600 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.28■□□□□ 0.52
SYN1P17600 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.28■□□□□ 0.52
SYN1P17600 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYN1P17600 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SYN1P17600 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYN1P17600 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SYN1P17600 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SYN1P17600 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYN1P17600 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms