Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.66■□□□□ 0.1
THBS1P07996 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.66■□□□□ 0.1
THBS1P07996 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.66■□□□□ 0.1
THBS1P07996 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.66■□□□□ 0.1
THBS1P07996 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.66■□□□□ 0.1
THBS1P07996 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.66■□□□□ 0.1
THBS1P07996 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
THBS1P07996 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.66■□□□□ 0.1
THBS1P07996 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
THBS1P07996 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.66■□□□□ 0.1
THBS1P07996 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 HLA-A-202ENST00000376806 1854 ntBASIC15.65■□□□□ 0.1
THBS1P07996 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
THBS1P07996 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.65■□□□□ 0.1
THBS1P07996 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
THBS1P07996 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.65■□□□□ 0.1
THBS1P07996 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.65■□□□□ 0.1
THBS1P07996 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.65■□□□□ 0.1
THBS1P07996 FGFR3P6-201ENST00000457012 610 ntBASIC15.65■□□□□ 0.1
THBS1P07996 SCARNA2-201ENST00000458748 420 ntBASIC15.65■□□□□ 0.1
THBS1P07996 HLA-J-202ENST00000469281 1241 ntBASIC15.65■□□□□ 0.1
THBS1P07996 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.65■□□□□ 0.1
THBS1P07996 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.65■□□□□ 0.1
THBS1P07996 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.65■□□□□ 0.1
THBS1P07996 AC091304.2-201ENST00000564639 760 ntBASIC15.65■□□□□ 0.1
THBS1P07996 AC139887.3-201ENST00000568585 713 ntBASIC15.65■□□□□ 0.1
THBS1P07996 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.65■□□□□ 0.1
THBS1P07996 AC008608.2-201ENST00000606089 416 ntBASIC15.65■□□□□ 0.1
THBS1P07996 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
THBS1P07996 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
THBS1P07996 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THBS1P07996 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
THBS1P07996 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
THBS1P07996 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
THBS1P07996 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
THBS1P07996 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.64■□□□□ 0.09
THBS1P07996 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 EMBP1-201ENST00000458200 901 ntBASIC15.64■□□□□ 0.09
THBS1P07996 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.64■□□□□ 0.09
THBS1P07996 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
THBS1P07996 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.64■□□□□ 0.09
THBS1P07996 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.64■□□□□ 0.09
THBS1P07996 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.64■□□□□ 0.09
THBS1P07996 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms