Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 AL023806.1-201ENST00000603994 1649 ntBASIC16.81■□□□□ 0.28
PCCBP05166 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCCBP05166 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 ELL2P1-201ENST00000413990 1906 ntBASIC16.8■□□□□ 0.28
PCCBP05166 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.8■□□□□ 0.28
PCCBP05166 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCCBP05166 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.8■□□□□ 0.28
PCCBP05166 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCCBP05166 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.8■□□□□ 0.28
PCCBP05166 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.8■□□□□ 0.28
PCCBP05166 DNAJB3-202ENST00000449667 1266 ntBASIC16.8■□□□□ 0.28
PCCBP05166 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.8■□□□□ 0.28
PCCBP05166 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 YBX1P5-201ENST00000509441 847 ntBASIC16.8■□□□□ 0.28
PCCBP05166 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCCBP05166 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 AL031432.2-201ENST00000566714 459 ntBASIC16.8■□□□□ 0.28
PCCBP05166 AL928711.1-201ENST00000570165 459 ntBASIC16.8■□□□□ 0.28
PCCBP05166 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 AL645728.2-201ENST00000641974 660 ntBASIC16.8■□□□□ 0.28
PCCBP05166 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCCBP05166 PCDHB18P-201ENST00000524813 2368 ntBASIC16.8■□□□□ 0.28
PCCBP05166 AC139713.2-201ENST00000641328 2723 ntBASIC16.8■□□□□ 0.28
PCCBP05166 AC092053.1-201ENST00000605787 1936 ntBASIC16.8■□□□□ 0.28
PCCBP05166 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.8■□□□□ 0.28
PCCBP05166 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCCBP05166 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCCBP05166 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.79■□□□□ 0.28
PCCBP05166 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.79■□□□□ 0.28
PCCBP05166 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.79■□□□□ 0.28
PCCBP05166 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 AP002472.1-201ENST00000577490 586 ntBASIC16.79■□□□□ 0.28
PCCBP05166 MIR4515-201ENST00000584082 81 ntBASIC16.79■□□□□ 0.28
PCCBP05166 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 AP001160.2-201ENST00000596071 487 ntBASIC16.79■□□□□ 0.28
PCCBP05166 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.79■□□□□ 0.28
PCCBP05166 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCCBP05166 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.79■□□□□ 0.28
PCCBP05166 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.78■□□□□ 0.28
PCCBP05166 TOP3BP1-201ENST00000420768 1380 ntBASIC16.78■□□□□ 0.28
PCCBP05166 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCCBP05166 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.78■□□□□ 0.28
PCCBP05166 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.78■□□□□ 0.28
PCCBP05166 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.78■□□□□ 0.28
PCCBP05166 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.78■□□□□ 0.28
PCCBP05166 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCCBP05166 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms