Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 HLA-J-203ENST00000494367 1087 ntBASIC18.55■□□□□ 0.56
VTNP04004 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
VTNP04004 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.55■□□□□ 0.56
VTNP04004 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 AC087641.1-201ENST00000557561 1021 ntBASIC18.55■□□□□ 0.56
VTNP04004 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.55■□□□□ 0.56
VTNP04004 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.55■□□□□ 0.56
VTNP04004 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.55■□□□□ 0.56
VTNP04004 AL031055.1-201ENST00000606362 631 ntBASIC18.55■□□□□ 0.56
VTNP04004 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 AL161645.1-201ENST00000622716 1255 ntBASIC18.55■□□□□ 0.56
VTNP04004 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.55■□□□□ 0.56
VTNP04004 LINC00628-201ENST00000628516 1289 ntBASIC18.55■□□□□ 0.56
VTNP04004 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VTNP04004 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
VTNP04004 KRT8P49-201ENST00000604166 1432 ntBASIC18.55■□□□□ 0.56
VTNP04004 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.55■□□□□ 0.56
VTNP04004 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VTNP04004 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 AL021920.2-201ENST00000624828 1351 ntBASIC18.55■□□□□ 0.56
VTNP04004 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VTNP04004 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 RNU1-129P-201ENST00000384064 167 ntBASIC18.54■□□□□ 0.56
VTNP04004 AC092474.2-201ENST00000424288 719 ntBASIC18.54■□□□□ 0.56
VTNP04004 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.54■□□□□ 0.56
VTNP04004 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 RN7SL589P-201ENST00000481268 310 ntBASIC18.54■□□□□ 0.56
VTNP04004 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 U1.21-201ENST00000580816 167 ntBASIC18.54■□□□□ 0.56
VTNP04004 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.54■□□□□ 0.56
VTNP04004 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.54■□□□□ 0.56
VTNP04004 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.54■□□□□ 0.56
VTNP04004 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTNP04004 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
VTNP04004 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.53■□□□□ 0.56
VTNP04004 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VTNP04004 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.53■□□□□ 0.56
VTNP04004 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.53■□□□□ 0.56
VTNP04004 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.53■□□□□ 0.56
VTNP04004 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VTNP04004 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VTNP04004 AC109635.5-201ENST00000533593 962 ntBASIC18.53■□□□□ 0.56
VTNP04004 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.53■□□□□ 0.56
VTNP04004 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VTNP04004 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.53■□□□□ 0.56
VTNP04004 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.53■□□□□ 0.56
VTNP04004 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VTNP04004 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VTNP04004 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTNP04004 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.53■□□□□ 0.56
VTNP04004 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VTNP04004 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VTNP04004 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
VTNP04004 AKAP8P1-201ENST00000434743 1349 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms