Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
APOEP02649 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
APOEP02649 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.84■□□□□ 0.45
APOEP02649 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 RPL13AP23-201ENST00000480739 586 ntBASIC17.84■□□□□ 0.45
APOEP02649 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.84■□□□□ 0.45
APOEP02649 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.84■□□□□ 0.45
APOEP02649 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
APOEP02649 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.84■□□□□ 0.45
APOEP02649 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
APOEP02649 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
APOEP02649 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.84■□□□□ 0.45
APOEP02649 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
APOEP02649 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
APOEP02649 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOEP02649 AC116353.5-201ENST00000638148 1699 ntBASIC17.83■□□□□ 0.45
APOEP02649 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APOEP02649 EGFEM1P-202ENST00000431685 1563 ntBASIC17.83■□□□□ 0.45
APOEP02649 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APOEP02649 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APOEP02649 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
APOEP02649 ZNF259P1-201ENST00000407656 1365 ntBASIC17.83■□□□□ 0.45
APOEP02649 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.83■□□□□ 0.45
APOEP02649 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
APOEP02649 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.83■□□□□ 0.44
APOEP02649 PKD1P5-201ENST00000532415 10291 ntBASIC17.83■□□□□ 0.44
APOEP02649 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
APOEP02649 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.83■□□□□ 0.44
APOEP02649 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.83■□□□□ 0.44
APOEP02649 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.83■□□□□ 0.44
APOEP02649 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
APOEP02649 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.83■□□□□ 0.44
APOEP02649 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.83■□□□□ 0.44
APOEP02649 UNC93B6-202ENST00000528242 690 ntBASIC17.83■□□□□ 0.44
APOEP02649 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 AC008667.4-201ENST00000607370 168 ntBASIC17.83■□□□□ 0.44
APOEP02649 Z83851.2-201ENST00000609564 659 ntBASIC17.83■□□□□ 0.44
APOEP02649 GGTLC5P-201ENST00000617623 998 ntBASIC17.83■□□□□ 0.44
APOEP02649 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.83■□□□□ 0.44
APOEP02649 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 PI4KAP1-204ENST00000612579 1703 ntBASIC17.83■□□□□ 0.44
APOEP02649 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
APOEP02649 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOEP02649 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.83■□□□□ 0.44
APOEP02649 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 AC104109.2-201ENST00000602919 1418 ntBASIC17.82■□□□□ 0.44
APOEP02649 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
APOEP02649 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.82■□□□□ 0.44
APOEP02649 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOEP02649 AC108751.1-201ENST00000490852 363 ntBASIC17.82■□□□□ 0.44
APOEP02649 IGHV3-65-201ENST00000523210 341 ntBASIC17.82■□□□□ 0.44
APOEP02649 SLC25A1P1-201ENST00000528351 927 ntBASIC17.82■□□□□ 0.44
APOEP02649 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.82■□□□□ 0.44
APOEP02649 AC145285.3-201ENST00000564603 959 ntBASIC17.82■□□□□ 0.44
APOEP02649 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.82■□□□□ 0.44
APOEP02649 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.82■□□□□ 0.44
APOEP02649 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms