Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SNX4O95219 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.06■□□□□ 0.16
SNX4O95219 FAM197Y8-203ENST00000450145 560 ntBASIC16.06■□□□□ 0.16
SNX4O95219 AF186996.4-201ENST00000467186 377 ntBASIC16.06■□□□□ 0.16
SNX4O95219 AC073648.2-201ENST00000510116 352 ntBASIC16.06■□□□□ 0.16
SNX4O95219 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.06■□□□□ 0.16
SNX4O95219 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 PCDHA1-201ENST00000378133 2726 ntBASIC16.06■□□□□ 0.16
SNX4O95219 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.06■□□□□ 0.16
SNX4O95219 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 AGGF1P2-201ENST00000426656 2106 ntBASIC16.06■□□□□ 0.16
SNX4O95219 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX4O95219 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX4O95219 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SNX4O95219 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SNX4O95219 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 AC005104.2-201ENST00000427818 678 ntBASIC16.05■□□□□ 0.16
SNX4O95219 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.05■□□□□ 0.16
SNX4O95219 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.05■□□□□ 0.16
SNX4O95219 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.05■□□□□ 0.16
SNX4O95219 AC073592.5-201ENST00000624854 528 ntBASIC16.05■□□□□ 0.16
SNX4O95219 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
SNX4O95219 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX4O95219 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNX4O95219 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
SNX4O95219 AC079776.2-201ENST00000641154 1609 ntBASIC16.05■□□□□ 0.16
SNX4O95219 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX4O95219 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SNX4O95219 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SNX4O95219 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX4O95219 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX4O95219 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SNX4O95219 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
SNX4O95219 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 RPS2P28-201ENST00000314255 741 ntBASIC16.04■□□□□ 0.16
SNX4O95219 AC003669.1-201ENST00000334569 611 ntBASIC16.04■□□□□ 0.16
SNX4O95219 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.04■□□□□ 0.16
SNX4O95219 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 KRT18P67-201ENST00000432816 1264 ntBASIC16.04■□□□□ 0.16
SNX4O95219 FDX1P1-201ENST00000449115 551 ntBASIC16.04■□□□□ 0.16
SNX4O95219 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX4O95219 AC109462.3-201ENST00000573934 613 ntBASIC16.04■□□□□ 0.16
SNX4O95219 AC019129.2-201ENST00000609837 1235 ntBASIC16.04■□□□□ 0.16
SNX4O95219 LINC01451-201ENST00000623792 534 ntBASIC16.04■□□□□ 0.16
SNX4O95219 AC073592.4-201ENST00000623827 446 ntBASIC16.04■□□□□ 0.16
SNX4O95219 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX4O95219 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SNX4O95219 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX4O95219 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms