Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 MIR940-201ENST00000401276 94 ntBASIC17.2■□□□□ 0.34
PRAMEF11O60813 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 AL513480.1-201ENST00000451731 511 ntBASIC17.2■□□□□ 0.34
PRAMEF11O60813 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 AC013467.2-201ENST00000605472 835 ntBASIC17.2■□□□□ 0.34
PRAMEF11O60813 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 AC131009.4-201ENST00000624048 1740 ntBASIC17.2■□□□□ 0.34
PRAMEF11O60813 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 AL645728.1-201ENST00000366221 2101 ntBASIC17.2■□□□□ 0.34
PRAMEF11O60813 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 AC006277.1-201ENST00000624348 1610 ntBASIC17.19■□□□□ 0.34
PRAMEF11O60813 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 HCG4-201ENST00000418983 998 ntBASIC17.19■□□□□ 0.34
PRAMEF11O60813 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.19■□□□□ 0.34
PRAMEF11O60813 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 POLD2P1-201ENST00000511220 997 ntBASIC17.19■□□□□ 0.34
PRAMEF11O60813 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.19■□□□□ 0.34
PRAMEF11O60813 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF11O60813 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 AL391256.1-201ENST00000443260 1855 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 AD000864.1-201ENST00000624076 2295 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 PGAM5P1-201ENST00000518923 814 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 MIR4515-201ENST00000584082 81 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 AC023141.13-201ENST00000604991 943 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 AC004877.2-201ENST00000623941 599 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 AC007064.4-201ENST00000637740 555 ntBASIC17.18■□□□□ 0.34
PRAMEF11O60813 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms