Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.29■□□□□ 0.2
PRICKLE3O43900 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.29■□□□□ 0.2
PRICKLE3O43900 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.29■□□□□ 0.2
PRICKLE3O43900 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.29■□□□□ 0.2
PRICKLE3O43900 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.29■□□□□ 0.2
PRICKLE3O43900 AC091167.2-201ENST00000579581 588 ntBASIC16.29■□□□□ 0.2
PRICKLE3O43900 MPDU1-223ENST00000582151 728 ntBASIC16.29■□□□□ 0.2
PRICKLE3O43900 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.29■□□□□ 0.2
PRICKLE3O43900 AC004877.2-201ENST00000623941 599 ntBASIC16.29■□□□□ 0.2
PRICKLE3O43900 AC092865.6-201ENST00000642101 219 ntBASIC16.29■□□□□ 0.2
PRICKLE3O43900 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 AC080080.1-201ENST00000625121 2420 ntBASIC16.29■□□□□ 0.2
PRICKLE3O43900 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRICKLE3O43900 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 AL513190.1-201ENST00000621254 727 ntBASIC16.28■□□□□ 0.2
PRICKLE3O43900 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRICKLE3O43900 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRICKLE3O43900 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 AL513480.1-201ENST00000451731 511 ntBASIC16.27■□□□□ 0.2
PRICKLE3O43900 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 KRT19P2-202ENST00000557173 1012 ntBASIC16.27■□□□□ 0.2
PRICKLE3O43900 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 AC040169.1-201ENST00000565382 521 ntBASIC16.27■□□□□ 0.2
PRICKLE3O43900 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 MIR4515-201ENST00000584082 81 ntBASIC16.27■□□□□ 0.2
PRICKLE3O43900 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 AC013467.2-201ENST00000605472 835 ntBASIC16.27■□□□□ 0.2
PRICKLE3O43900 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRICKLE3O43900 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.27■□□□□ 0.2
PRICKLE3O43900 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRICKLE3O43900 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PRICKLE3O43900 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRICKLE3O43900 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.27■□□□□ 0.19
PRICKLE3O43900 AC025580.3-201ENST00000617932 1424 ntBASIC16.27■□□□□ 0.19
PRICKLE3O43900 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRICKLE3O43900 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms