Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.2□□□□□ -0.46
PAX4O43316 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.2□□□□□ -0.46
PAX4O43316 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 AC008608.2-201ENST00000606089 416 ntBASIC12.2□□□□□ -0.46
PAX4O43316 IFNL4P1-201ENST00000607083 540 ntBASIC12.2□□□□□ -0.46
PAX4O43316 AP001269.4-201ENST00000609611 512 ntBASIC12.2□□□□□ -0.46
PAX4O43316 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.2□□□□□ -0.46
PAX4O43316 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.2□□□□□ -0.46
PAX4O43316 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PAX4O43316 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.2□□□□□ -0.46
PAX4O43316 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 AL356309.3-201ENST00000624132 1934 ntBASIC12.19□□□□□ -0.46
PAX4O43316 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 AC079776.2-201ENST00000641154 1609 ntBASIC12.19□□□□□ -0.46
PAX4O43316 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.19□□□□□ -0.46
PAX4O43316 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.19□□□□□ -0.46
PAX4O43316 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.19□□□□□ -0.46
PAX4O43316 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.19□□□□□ -0.46
PAX4O43316 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.19□□□□□ -0.46
PAX4O43316 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 AL589935.2-201ENST00000616471 1231 ntBASIC12.19□□□□□ -0.46
PAX4O43316 AL691432.3-201ENST00000621860 400 ntBASIC12.19□□□□□ -0.46
PAX4O43316 AL139288.1-201ENST00000623748 933 ntBASIC12.19□□□□□ -0.46
PAX4O43316 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 PP12613-201ENST00000424958 2230 ntBASIC12.19□□□□□ -0.46
PAX4O43316 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.19□□□□□ -0.46
PAX4O43316 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.19□□□□□ -0.46
PAX4O43316 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PAX4O43316 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.19□□□□□ -0.46
PAX4O43316 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.18□□□□□ -0.46
PAX4O43316 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PAX4O43316 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.18□□□□□ -0.46
PAX4O43316 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PAX4O43316 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms