Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNRC18O15417 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.11■□□□□ 0.49
TNRC18O15417 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.11■□□□□ 0.49
TNRC18O15417 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNRC18O15417 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNRC18O15417 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.11■□□□□ 0.49
TNRC18O15417 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.11■□□□□ 0.49
TNRC18O15417 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.11■□□□□ 0.49
TNRC18O15417 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNRC18O15417 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNRC18O15417 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.11■□□□□ 0.49
TNRC18O15417 NDUFV2P1-201ENST00000596415 907 ntBASIC18.11■□□□□ 0.49
TNRC18O15417 AC008687.7-202ENST00000637404 953 ntBASIC18.11■□□□□ 0.49
TNRC18O15417 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.11■□□□□ 0.49
TNRC18O15417 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
TNRC18O15417 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
TNRC18O15417 SERBP1P3-201ENST00000459980 809 ntBASIC18.1■□□□□ 0.49
TNRC18O15417 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.1■□□□□ 0.49
TNRC18O15417 MIR3907-201ENST00000579424 151 ntBASIC18.1■□□□□ 0.49
TNRC18O15417 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TNRC18O15417 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.1■□□□□ 0.49
TNRC18O15417 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.1■□□□□ 0.49
TNRC18O15417 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.1■□□□□ 0.49
TNRC18O15417 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.1■□□□□ 0.49
TNRC18O15417 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.1■□□□□ 0.49
TNRC18O15417 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.1■□□□□ 0.49
TNRC18O15417 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.1■□□□□ 0.49
TNRC18O15417 EEF1DP1-201ENST00000585891 896 ntBASIC18.1■□□□□ 0.49
TNRC18O15417 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.1■□□□□ 0.49
TNRC18O15417 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.1■□□□□ 0.49
TNRC18O15417 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNRC18O15417 AC093484.2-201ENST00000580996 2166 ntBASIC18.1■□□□□ 0.49
TNRC18O15417 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TNRC18O15417 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TNRC18O15417 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.09■□□□□ 0.49
TNRC18O15417 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.09■□□□□ 0.49
TNRC18O15417 AC245884.6-201ENST00000515672 1067 ntBASIC18.09■□□□□ 0.49
TNRC18O15417 RNA5SP410-201ENST00000516285 106 ntBASIC18.09■□□□□ 0.49
TNRC18O15417 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.09■□□□□ 0.49
TNRC18O15417 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
TNRC18O15417 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
TNRC18O15417 AL139011.1-202ENST00000642063 584 ntBASIC18.09■□□□□ 0.49
TNRC18O15417 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.09■□□□□ 0.49
TNRC18O15417 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.09■□□□□ 0.49
TNRC18O15417 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.09■□□□□ 0.49
TNRC18O15417 CTBP2P4-201ENST00000513884 920 ntBASIC18.09■□□□□ 0.49
TNRC18O15417 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.09■□□□□ 0.49
TNRC18O15417 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.09■□□□□ 0.49
TNRC18O15417 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.09■□□□□ 0.49
TNRC18O15417 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNRC18O15417 CNN2P8-201ENST00000421872 913 ntBASIC18.09■□□□□ 0.49
TNRC18O15417 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TNRC18O15417 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.09■□□□□ 0.49
TNRC18O15417 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.09■□□□□ 0.49
TNRC18O15417 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNRC18O15417 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TNRC18O15417 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
TNRC18O15417 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 AC006480.2-201ENST00000609770 1337 ntBASIC18.08■□□□□ 0.49
TNRC18O15417 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TNRC18O15417 AL137060.1-201ENST00000618151 2648 ntBASIC18.08■□□□□ 0.49
TNRC18O15417 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.08■□□□□ 0.49
TNRC18O15417 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNRC18O15417 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.08■□□□□ 0.49
TNRC18O15417 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.08■□□□□ 0.49
TNRC18O15417 AP001527.2-201ENST00000614441 631 ntBASIC18.08■□□□□ 0.49
TNRC18O15417 CU634019.7-201ENST00000624153 1185 ntBASIC18.08■□□□□ 0.49
TNRC18O15417 FP236241.2-201ENST00000624906 1185 ntBASIC18.08■□□□□ 0.49
TNRC18O15417 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
TNRC18O15417 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TNRC18O15417 AL020996.1-203ENST00000536896 2307 ntBASIC18.08■□□□□ 0.48
TNRC18O15417 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
TNRC18O15417 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNRC18O15417 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.08■□□□□ 0.48
TNRC18O15417 AC125604.1-201ENST00000496255 707 ntBASIC18.08■□□□□ 0.48
TNRC18O15417 KRT90P-201ENST00000549264 1064 ntBASIC18.08■□□□□ 0.48
TNRC18O15417 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.08■□□□□ 0.48
TNRC18O15417 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.08■□□□□ 0.48
TNRC18O15417 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.08■□□□□ 0.48
TNRC18O15417 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.08■□□□□ 0.48
TNRC18O15417 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms