Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 UXT-AS1-201ENST00000590504 1525 ntBASIC14.84□□□□□ -0.03
MBD3L3A6NE82 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 RBPMS2P1-201ENST00000437762 623 ntBASIC14.84□□□□□ -0.03
MBD3L3A6NE82 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 AC011467.4-201ENST00000594891 528 ntBASIC14.84□□□□□ -0.03
MBD3L3A6NE82 AC013467.2-201ENST00000605472 835 ntBASIC14.84□□□□□ -0.03
MBD3L3A6NE82 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.83□□□□□ -0.03
MBD3L3A6NE82 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AC018470.1-201ENST00000624790 3129 ntBASIC14.83□□□□□ -0.04
MBD3L3A6NE82 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.83□□□□□ -0.04
MBD3L3A6NE82 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AC069262.1-201ENST00000539058 672 ntBASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AP000842.3-202ENST00000569238 1080 ntBASIC14.83□□□□□ -0.04
MBD3L3A6NE82 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AC027307.2-201ENST00000591252 911 ntBASIC14.83□□□□□ -0.04
MBD3L3A6NE82 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L3A6NE82 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 MIR346-201ENST00000362234 95 ntBASIC14.82□□□□□ -0.04
MBD3L3A6NE82 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.82□□□□□ -0.04
MBD3L3A6NE82 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms