Protein–RNA interactions for Protein: A2RUS2

DENND3, DENN domain-containing protein 3, humanhuman

Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3A2RUS2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 AP001094.4-201ENST00000579008 2176 ntBASIC18.78■□□□□ 0.6
DENND3A2RUS2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 AL031432.2-201ENST00000566714 459 ntBASIC18.78■□□□□ 0.6
DENND3A2RUS2 AL928711.1-201ENST00000570165 459 ntBASIC18.78■□□□□ 0.6
DENND3A2RUS2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND3A2RUS2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DENND3A2RUS2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 AC012313.1-201ENST00000593393 3059 ntBASIC18.77■□□□□ 0.6
DENND3A2RUS2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ACTG1P14-201ENST00000446382 1122 ntBASIC18.77■□□□□ 0.6
DENND3A2RUS2 SLC25A6P2-201ENST00000497974 877 ntBASIC18.77■□□□□ 0.6
DENND3A2RUS2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND3A2RUS2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND3A2RUS2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND3A2RUS2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.77■□□□□ 0.59
DENND3A2RUS2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DENND3A2RUS2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DENND3A2RUS2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND3A2RUS2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 AC020916.1-201ENST00000587762 1774 ntBASIC18.76■□□□□ 0.59
DENND3A2RUS2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 AC091812.2-201ENST00000619081 385 ntBASIC18.76■□□□□ 0.59
DENND3A2RUS2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND3A2RUS2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DENND3A2RUS2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND3A2RUS2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DENND3A2RUS2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND3A2RUS2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND3A2RUS2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND3A2RUS2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms