Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 AL138831.2-201ENST00000606564 490 ntBASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 AC023511.2-201ENST00000618803 211 ntBASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 AL031284.1-201ENST00000419297 478 ntBASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 AP001005.1-201ENST00000571755 1248 ntBASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 MIR7706-201ENST00000613747 67 ntBASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 BX640515.1-201ENST00000617215 977 ntBASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 PCDHA1-201ENST00000378133 2726 ntBASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX49Q9Y6V7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 FGFR3P6-201ENST00000457012 610 ntBASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 AL773604.1-201ENST00000617417 272 ntBASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 AC009154.2-201ENST00000621177 724 ntBASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX49Q9Y6V7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 AC125634.1-201ENST00000438758 1403 ntBASIC20.47■□□□□ 0.87
DDX49Q9Y6V7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms