Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 PAWRP1-201ENST00000451083 565 ntBASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AC112191.1-201ENST00000523689 701 ntBASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AL139327.4-201ENST00000612362 153 ntBASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 REXO1L3P-201ENST00000622202 1288 ntBASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SSX2IPQ9Y2D8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 AC092902.6-201ENST00000641783 218 ntBASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SSX2IPQ9Y2D8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms