Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 CTBP2P3-201ENST00000585629 1255 ntBASIC24.82■■□□□ 1.56
MLH3Q9UHC1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
MLH3Q9UHC1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 ABALON-201ENST00000629058 1903 ntBASIC24.81■■□□□ 1.56
MLH3Q9UHC1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 AC016396.2-201ENST00000562575 1417 ntBASIC24.81■■□□□ 1.56
MLH3Q9UHC1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 SPDYE17-201ENST00000412399 783 ntBASIC24.81■■□□□ 1.56
MLH3Q9UHC1 SERBP1P3-201ENST00000459980 809 ntBASIC24.81■■□□□ 1.56
MLH3Q9UHC1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 KRT8P12-202ENST00000472924 1397 ntBASIC24.81■■□□□ 1.56
MLH3Q9UHC1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
MLH3Q9UHC1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 TNXA-203ENST00000507684 2038 ntBASIC24.8■■□□□ 1.56
MLH3Q9UHC1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 AC023310.3-201ENST00000557027 670 ntBASIC24.8■■□□□ 1.56
MLH3Q9UHC1 AC100756.1-201ENST00000562736 682 ntBASIC24.8■■□□□ 1.56
MLH3Q9UHC1 AC138749.3-201ENST00000567691 622 ntBASIC24.8■■□□□ 1.56
MLH3Q9UHC1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 AC116165.1-201ENST00000611806 668 ntBASIC24.8■■□□□ 1.56
MLH3Q9UHC1 COX11-210ENST00000639671 696 ntBASIC24.8■■□□□ 1.56
MLH3Q9UHC1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
MLH3Q9UHC1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 AC098850.1-201ENST00000419919 790 ntBASIC24.79■■□□□ 1.56
MLH3Q9UHC1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 AP005482.1-201ENST00000563722 1273 ntBASIC24.79■■□□□ 1.56
MLH3Q9UHC1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC24.79■■□□□ 1.56
MLH3Q9UHC1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 AC245100.3-201ENST00000441281 285 ntBASIC24.78■■□□□ 1.56
MLH3Q9UHC1 KRT223P-202ENST00000449164 1292 ntBASIC24.78■■□□□ 1.56
MLH3Q9UHC1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
MLH3Q9UHC1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
MLH3Q9UHC1 ANKRD19P-201ENST00000338192 862 ntBASIC24.77■■□□□ 1.56
MLH3Q9UHC1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
MLH3Q9UHC1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC24.77■■□□□ 1.56
MLH3Q9UHC1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC24.77■■□□□ 1.56
MLH3Q9UHC1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms