Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AC005237.2-201ENST00000434368 219 ntBASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AL161645.1-201ENST00000622716 1255 ntBASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 LINC00896-202ENST00000609602 2128 ntBASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 AC026471.1-201ENST00000564629 3026 ntBASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRIT1Q9P2V4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.39■□□□□ 0.22
LRIT1Q9P2V4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 AL592309.1-201ENST00000443127 649 ntBASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 RN7SL589P-201ENST00000481268 310 ntBASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 LINC00628-201ENST00000628516 1289 ntBASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 PKD1P1-201ENST00000458669 6805 ntBASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT1Q9P2V4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 MIR770-201ENST00000390219 98 ntBASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AL627223.1-201ENST00000416693 442 ntBASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AC079140.1-201ENST00000508039 487 ntBASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AC109322.1-201ENST00000524499 1264 ntBASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms