Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 AC107918.2-201ENST00000530817 355 ntBASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 AL512638.1-201ENST00000457493 794 ntBASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 CR383656.12-201ENST00000549567 513 ntBASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDLIM7Q9NR12 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDLIM7Q9NR12 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.89■□□□□ 0.62
PDLIM7Q9NR12 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.89■□□□□ 0.62
PDLIM7Q9NR12 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 AL359881.2-201ENST00000602973 570 ntBASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 AL358472.5-202ENST00000641448 1267 ntBASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 AC005332.8-201ENST00000622750 2735 ntBASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM7Q9NR12 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 SPDYE7P-202ENST00000420373 878 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms