Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PRDM9Q9NQV7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC092053.1-201ENST00000605787 1936 ntBASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 MTND4LP12-201ENST00000448237 295 ntBASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC108073.2-201ENST00000464002 357 ntBASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC034105.1-201ENST00000563488 319 ntBASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 AC060834.1-201ENST00000443027 2032 ntBASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRDM9Q9NQV7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.08■□□□□ 0.17
PRDM9Q9NQV7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 MRPL20P1-201ENST00000400819 433 ntBASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms