Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 KRT18P67-201ENST00000432816 1264 ntBASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 FDX1P1-201ENST00000449115 551 ntBASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 AC073648.2-201ENST00000510116 352 ntBASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 MTDHP4-201ENST00000600287 670 ntBASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 HNRNPDP1-201ENST00000439535 754 ntBASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 AC018712.1-201ENST00000455767 687 ntBASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 AC025062.2-201ENST00000605477 670 ntBASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 AL022326.1-202ENST00000641533 845 ntBASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 LYSMD4-203ENST00000378904 2122 ntBASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NECTIN3Q9NQS3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 AL513477.1-201ENST00000602865 2407 ntBASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 RPS2P1-201ENST00000434010 821 ntBASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 AF186996.4-201ENST00000467186 377 ntBASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 PCDHA14-201ENST00000506751 2298 ntBASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NECTIN3Q9NQS3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms