Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 AC107918.2-201ENST00000530817 355 ntBASIC17.61■□□□□ 0.41
HPS4Q9NQG7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 AC139713.2-201ENST00000641328 2723 ntBASIC17.6■□□□□ 0.41
HPS4Q9NQG7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 AC112191.1-201ENST00000523689 701 ntBASIC17.6■□□□□ 0.41
HPS4Q9NQG7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 MIR3197-201ENST00000582241 73 ntBASIC17.6■□□□□ 0.41
HPS4Q9NQG7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS4Q9NQG7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 MIR770-201ENST00000390219 98 ntBASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 HLA-J-203ENST00000494367 1087 ntBASIC17.59■□□□□ 0.41
HPS4Q9NQG7 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS4Q9NQG7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.58■□□□□ 0.41
HPS4Q9NQG7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS4Q9NQG7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HPS4Q9NQG7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms