Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.34■□□□□ 0.21
PIF1Q9H611 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.34■□□□□ 0.21
PIF1Q9H611 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PIF1Q9H611 MIR662-201ENST00000384847 95 ntBASIC16.34■□□□□ 0.21
PIF1Q9H611 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
PIF1Q9H611 AC092647.4-201ENST00000457211 535 ntBASIC16.34■□□□□ 0.21
PIF1Q9H611 DUX4L26-201ENST00000489078 1255 ntBASIC16.34■□□□□ 0.21
PIF1Q9H611 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.34■□□□□ 0.21
PIF1Q9H611 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.34■□□□□ 0.21
PIF1Q9H611 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.34■□□□□ 0.21
PIF1Q9H611 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.34■□□□□ 0.21
PIF1Q9H611 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.34■□□□□ 0.21
PIF1Q9H611 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 AL391005.1-201ENST00000623953 2435 ntBASIC16.34■□□□□ 0.21
PIF1Q9H611 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PIF1Q9H611 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
PIF1Q9H611 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PIF1Q9H611 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.21
PIF1Q9H611 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.33■□□□□ 0.21
PIF1Q9H611 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PIF1Q9H611 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PIF1Q9H611 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PIF1Q9H611 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
PIF1Q9H611 AC026691.1-201ENST00000602502 2017 ntBASIC16.33■□□□□ 0.21
PIF1Q9H611 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
PIF1Q9H611 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
PIF1Q9H611 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.33■□□□□ 0.2
PIF1Q9H611 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.33■□□□□ 0.2
PIF1Q9H611 AC007967.3-201ENST00000434308 558 ntBASIC16.33■□□□□ 0.2
PIF1Q9H611 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.33■□□□□ 0.2
PIF1Q9H611 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.33■□□□□ 0.2
PIF1Q9H611 AC022616.7-201ENST00000525383 220 ntBASIC16.33■□□□□ 0.2
PIF1Q9H611 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.33■□□□□ 0.2
PIF1Q9H611 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
PIF1Q9H611 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.33■□□□□ 0.2
PIF1Q9H611 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.33■□□□□ 0.2
PIF1Q9H611 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PIF1Q9H611 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.33■□□□□ 0.2
PIF1Q9H611 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
PIF1Q9H611 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.32■□□□□ 0.2
PIF1Q9H611 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.32■□□□□ 0.2
PIF1Q9H611 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.32■□□□□ 0.2
PIF1Q9H611 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.32■□□□□ 0.2
PIF1Q9H611 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 VENTXP5-201ENST00000523979 775 ntBASIC16.32■□□□□ 0.2
PIF1Q9H611 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.32■□□□□ 0.2
PIF1Q9H611 RNF126P1-202ENST00000569893 925 ntBASIC16.32■□□□□ 0.2
PIF1Q9H611 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.32■□□□□ 0.2
PIF1Q9H611 AC097374.2-201ENST00000618617 1306 ntBASIC16.32■□□□□ 0.2
PIF1Q9H611 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 Z83836.1-201ENST00000624605 1642 ntBASIC16.32■□□□□ 0.2
PIF1Q9H611 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PIF1Q9H611 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PIF1Q9H611 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms