Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CRNKL1Q9BZJ0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.17■□□□□ 0.82
CRNKL1Q9BZJ0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.17■□□□□ 0.82
CRNKL1Q9BZJ0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRNKL1Q9BZJ0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRNKL1Q9BZJ0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.17■□□□□ 0.82
CRNKL1Q9BZJ0 AC131009.4-201ENST00000624048 1740 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 AP001350.2-201ENST00000625104 1094 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 TUBB8P12-201ENST00000308911 1335 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 TUBB7P-202ENST00000428444 1305 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 TUBB8P7-204ENST00000567960 1332 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 AC139713.2-201ENST00000641328 2723 ntBASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CRNKL1Q9BZJ0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CRNKL1Q9BZJ0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CRNKL1Q9BZJ0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CRNKL1Q9BZJ0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CRNKL1Q9BZJ0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.14■□□□□ 0.82
CRNKL1Q9BZJ0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CRNKL1Q9BZJ0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.14■□□□□ 0.82
CRNKL1Q9BZJ0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 CNN2P11-201ENST00000429351 262 ntBASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 AC099522.2-201ENST00000607001 744 ntBASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CRNKL1Q9BZJ0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms