Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 AC092902.6-201ENST00000641783 218 ntBASIC13.85□□□□□ -0.19
ZNF48Q96MX3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF48Q96MX3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AC092919.2-201ENST00000623631 1645 ntBASIC13.84□□□□□ -0.19
ZNF48Q96MX3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 FAM185BP-201ENST00000443595 716 ntBASIC13.84□□□□□ -0.19
ZNF48Q96MX3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 PAWRP1-201ENST00000451083 565 ntBASIC13.84□□□□□ -0.19
ZNF48Q96MX3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 AC068137.2-201ENST00000605408 478 ntBASIC13.84□□□□□ -0.19
ZNF48Q96MX3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 ACTL9-202ENST00000612068 1252 ntBASIC13.84□□□□□ -0.19
ZNF48Q96MX3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
ZNF48Q96MX3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms