Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 HMGA1P7-201ENST00000406908 502 ntBASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 DNAJB3-201ENST00000446806 729 ntBASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
ECHDC3Q96DC8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ECHDC3Q96DC8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ECHDC3Q96DC8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ECHDC3Q96DC8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ECHDC3Q96DC8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ECHDC3Q96DC8 AC012569.1-201ENST00000591191 1524 ntBASIC16.96■□□□□ 0.3
ECHDC3Q96DC8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 PCDHB17P-201ENST00000539533 2393 ntBASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 AC013467.2-201ENST00000605472 835 ntBASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 LINC00895-201ENST00000629028 1637 ntBASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ECHDC3Q96DC8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 KRT18P13-201ENST00000400056 1290 ntBASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 RPSAP43-201ENST00000402237 625 ntBASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 GPX1P2-201ENST00000429271 606 ntBASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 AC092865.5-201ENST00000545435 363 ntBASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 AC087641.1-201ENST00000557561 1021 ntBASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 AC068137.2-201ENST00000605408 478 ntBASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms