Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX1Q92499 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX1Q92499 ELK2BP-201ENST00000415014 1224 ntBASIC18.11■□□□□ 0.49
DDX1Q92499 AC004967.1-201ENST00000453589 447 ntBASIC18.11■□□□□ 0.49
DDX1Q92499 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX1Q92499 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX1Q92499 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX1Q92499 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
DDX1Q92499 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.11■□□□□ 0.49
DDX1Q92499 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX1Q92499 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX1Q92499 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX1Q92499 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
DDX1Q92499 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX1Q92499 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
DDX1Q92499 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX1Q92499 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
DDX1Q92499 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX1Q92499 AC073621.1-201ENST00000392730 636 ntBASIC18.1■□□□□ 0.49
DDX1Q92499 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 RPSAP43-201ENST00000402237 625 ntBASIC18.1■□□□□ 0.49
DDX1Q92499 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 LAGE3P1-201ENST00000425356 484 ntBASIC18.1■□□□□ 0.49
DDX1Q92499 GPX1P2-201ENST00000429271 606 ntBASIC18.1■□□□□ 0.49
DDX1Q92499 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX1Q92499 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX1Q92499 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX1Q92499 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX1Q92499 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.1■□□□□ 0.49
DDX1Q92499 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX1Q92499 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
DDX1Q92499 AC148477.8-201ENST00000624298 468 ntBASIC18.1■□□□□ 0.49
DDX1Q92499 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DDX1Q92499 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 AL603756.1-201ENST00000606511 2163 ntBASIC18.1■□□□□ 0.49
DDX1Q92499 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX1Q92499 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX1Q92499 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 KRT8P49-201ENST00000604166 1432 ntBASIC18.09■□□□□ 0.49
DDX1Q92499 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DDX1Q92499 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX1Q92499 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DDX1Q92499 RPS8P6-201ENST00000426177 609 ntBASIC18.09■□□□□ 0.49
DDX1Q92499 RPS2P1-201ENST00000434010 821 ntBASIC18.09■□□□□ 0.49
DDX1Q92499 HNRNPDP1-201ENST00000439535 754 ntBASIC18.09■□□□□ 0.49
DDX1Q92499 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX1Q92499 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX1Q92499 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX1Q92499 AC145285.3-201ENST00000564603 959 ntBASIC18.09■□□□□ 0.49
DDX1Q92499 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX1Q92499 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
DDX1Q92499 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.09■□□□□ 0.49
DDX1Q92499 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX1Q92499 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DDX1Q92499 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
DDX1Q92499 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX1Q92499 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX1Q92499 LINC00895-201ENST00000629028 1637 ntBASIC18.09■□□□□ 0.49
DDX1Q92499 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
DDX1Q92499 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.08■□□□□ 0.49
DDX1Q92499 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.08■□□□□ 0.49
DDX1Q92499 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.08■□□□□ 0.49
DDX1Q92499 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
DDX1Q92499 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms