Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 AC004835.2-201ENST00000603762 682 ntBASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 AC106028.4-201ENST00000614509 607 ntBASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ADH5P3-201ENST00000433842 1137 ntBASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 AC112191.1-201ENST00000523689 701 ntBASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 AC022145.2-201ENST00000598203 171 ntBASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 LINC02084-201ENST00000606069 1096 ntBASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHKBP1Q8TBC3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 AL121761.2-201ENST00000598007 1648 ntBASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.83■□□□□ 0.45
SHKBP1Q8TBC3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.83■□□□□ 0.44
SHKBP1Q8TBC3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms