Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 FAM197Y8-203ENST00000450145 560 ntBASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 RNPS1P1-201ENST00000507437 918 ntBASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH19Q8TAB3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AL021920.2-201ENST00000624828 1351 ntBASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 KRT18P27-201ENST00000427733 1299 ntBASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AC120114.3-201ENST00000611923 658 ntBASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 AL118508.1-201ENST00000613502 2345 ntBASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH19Q8TAB3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AL603756.1-201ENST00000606511 2163 ntBASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AC073621.1-201ENST00000392730 636 ntBASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 OR7E14P-202ENST00000530490 1290 ntBASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AC006557.2-201ENST00000592985 1240 ntBASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AL773604.1-201ENST00000617417 272 ntBASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms