Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 AC006116.8-202ENST00000587620 1550 ntBASIC18.48■□□□□ 0.55
VPS52Q8N1B4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS52Q8N1B4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 ACTG1P4-201ENST00000425123 1122 ntBASIC18.47■□□□□ 0.55
VPS52Q8N1B4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 ACTG1P14-201ENST00000446382 1122 ntBASIC18.47■□□□□ 0.55
VPS52Q8N1B4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 AC009053.2-201ENST00000563701 2365 ntBASIC18.47■□□□□ 0.55
VPS52Q8N1B4 AL590787.1-201ENST00000568856 1315 ntBASIC18.47■□□□□ 0.55
VPS52Q8N1B4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS52Q8N1B4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 CXCL1P1-201ENST00000502804 216 ntBASIC18.46■□□□□ 0.55
VPS52Q8N1B4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 AC027612.4-201ENST00000605371 583 ntBASIC18.46■□□□□ 0.55
VPS52Q8N1B4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 AC091812.2-201ENST00000619081 385 ntBASIC18.46■□□□□ 0.55
VPS52Q8N1B4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.46■□□□□ 0.55
VPS52Q8N1B4 FER1L4-210ENST00000615531 5998 ntBASIC18.46■□□□□ 0.55
VPS52Q8N1B4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms