Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 AL603756.1-201ENST00000606511 2163 ntBASIC15.76■□□□□ 0.11
VRK2Q86Y07 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 AC106795.1-205ENST00000512851 1056 ntBASIC15.75■□□□□ 0.11
VRK2Q86Y07 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 DUX4L17-201ENST00000557360 1267 ntBASIC15.75■□□□□ 0.11
VRK2Q86Y07 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 MIR3652-201ENST00000579335 131 ntBASIC15.75■□□□□ 0.11
VRK2Q86Y07 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
VRK2Q86Y07 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK2Q86Y07 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 TUBB8P12-201ENST00000308911 1335 ntBASIC15.74■□□□□ 0.11
VRK2Q86Y07 TUBB7P-202ENST00000428444 1305 ntBASIC15.74■□□□□ 0.11
VRK2Q86Y07 TUBB8P7-204ENST00000567960 1332 ntBASIC15.74■□□□□ 0.11
VRK2Q86Y07 AL590787.1-201ENST00000568856 1315 ntBASIC15.74■□□□□ 0.11
VRK2Q86Y07 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 AL353135.1-201ENST00000606729 504 ntBASIC15.74■□□□□ 0.11
VRK2Q86Y07 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK2Q86Y07 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VRK2Q86Y07 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms