Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-BQ31612 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.4■□□□□ 0.22
HLA-BQ31612 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-BQ31612 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-BQ31612 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-BQ31612 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 AC022144.1-201ENST00000602255 1580 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 AP3S2-216ENST00000617003 1561 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-BQ31612 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 AC142381.1-201ENST00000426099 345 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 AC105233.2-201ENST00000523697 349 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 AF228730.5-201ENST00000530288 346 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 AL596325.1-201ENST00000563991 1082 ntBASIC16.39■□□□□ 0.21
HLA-BQ31612 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-BQ31612 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-BQ31612 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-BQ31612 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-BQ31612 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.38■□□□□ 0.21
HLA-BQ31612 NME2P1-201ENST00000426182 414 ntBASIC16.38■□□□□ 0.21
HLA-BQ31612 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-BQ31612 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-BQ31612 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-BQ31612 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-BQ31612 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-BQ31612 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.38■□□□□ 0.21
HLA-BQ31612 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-BQ31612 AL008721.1-201ENST00000609964 604 ntBASIC16.38■□□□□ 0.21
HLA-BQ31612 SPDYE12P-201ENST00000618416 771 ntBASIC16.38■□□□□ 0.21
HLA-BQ31612 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-BQ31612 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-BQ31612 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-BQ31612 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-BQ31612 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms