Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 DOC2GP-202ENST00000514950 1163 ntBASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AL138918.1-201ENST00000568306 659 ntBASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 CETN4P-206ENST00000642099 2168 ntBASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 BRWD1P1-201ENST00000401091 371 ntBASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 AL589739.1-201ENST00000607720 493 ntBASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 AL035456.1-201ENST00000456064 1369 ntBASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.36■□□□□ 0.21
RSPO4Q2I0M5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 RPL37AP1-201ENST00000412502 279 ntBASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO4Q2I0M5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AL135999.2-201ENST00000622438 1686 ntBASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms