Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SREBF2Q12772 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SREBF2Q12772 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.28■□□□□ 0.68
SREBF2Q12772 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 FAM86MP-201ENST00000340703 885 ntBASIC19.28■□□□□ 0.68
SREBF2Q12772 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.28■□□□□ 0.68
SREBF2Q12772 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.28■□□□□ 0.68
SREBF2Q12772 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.28■□□□□ 0.68
SREBF2Q12772 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.28■□□□□ 0.68
SREBF2Q12772 AC092552.1-201ENST00000547243 906 ntBASIC19.28■□□□□ 0.68
SREBF2Q12772 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SREBF2Q12772 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.28■□□□□ 0.68
SREBF2Q12772 MIR4259-201ENST00000584466 101 ntBASIC19.28■□□□□ 0.68
SREBF2Q12772 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.28■□□□□ 0.68
SREBF2Q12772 AL133215.2-201ENST00000609242 977 ntBASIC19.28■□□□□ 0.68
SREBF2Q12772 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.28■□□□□ 0.68
SREBF2Q12772 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SREBF2Q12772 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SREBF2Q12772 REXO1L6P-201ENST00000603433 1515 ntBASIC19.28■□□□□ 0.68
SREBF2Q12772 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.28■□□□□ 0.68
SREBF2Q12772 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.28■□□□□ 0.68
SREBF2Q12772 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SREBF2Q12772 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.28■□□□□ 0.68
SREBF2Q12772 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SREBF2Q12772 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.27■□□□□ 0.68
SREBF2Q12772 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.27■□□□□ 0.68
SREBF2Q12772 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.27■□□□□ 0.68
SREBF2Q12772 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SREBF2Q12772 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SREBF2Q12772 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 MEP1AP4-201ENST00000423244 1087 ntBASIC19.27■□□□□ 0.68
SREBF2Q12772 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.27■□□□□ 0.68
SREBF2Q12772 BANF1P1-201ENST00000553684 263 ntBASIC19.27■□□□□ 0.68
SREBF2Q12772 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
SREBF2Q12772 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.27■□□□□ 0.68
SREBF2Q12772 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SREBF2Q12772 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SREBF2Q12772 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SREBF2Q12772 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.27■□□□□ 0.67
SREBF2Q12772 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SREBF2Q12772 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SREBF2Q12772 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SREBF2Q12772 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.26■□□□□ 0.67
SREBF2Q12772 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
SREBF2Q12772 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SREBF2Q12772 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SREBF2Q12772 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.26■□□□□ 0.67
SREBF2Q12772 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SREBF2Q12772 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.26■□□□□ 0.67
SREBF2Q12772 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.26■□□□□ 0.67
SREBF2Q12772 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.26■□□□□ 0.67
SREBF2Q12772 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SREBF2Q12772 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.26■□□□□ 0.67
SREBF2Q12772 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SREBF2Q12772 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.25■□□□□ 0.67
SREBF2Q12772 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SREBF2Q12772 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
SREBF2Q12772 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SREBF2Q12772 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.25■□□□□ 0.67
SREBF2Q12772 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SREBF2Q12772 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.25■□□□□ 0.67
SREBF2Q12772 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SREBF2Q12772 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SREBF2Q12772 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
SREBF2Q12772 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SREBF2Q12772 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SREBF2Q12772 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.25■□□□□ 0.67
SREBF2Q12772 MYCLP2-201ENST00000449268 967 ntBASIC19.25■□□□□ 0.67
SREBF2Q12772 AC098859.1-201ENST00000502915 1238 ntBASIC19.25■□□□□ 0.67
SREBF2Q12772 AC119751.2-201ENST00000504529 210 ntBASIC19.25■□□□□ 0.67
SREBF2Q12772 RNA5SP410-201ENST00000516285 106 ntBASIC19.25■□□□□ 0.67
SREBF2Q12772 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.25■□□□□ 0.67
SREBF2Q12772 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.25■□□□□ 0.67
SREBF2Q12772 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.25■□□□□ 0.67
SREBF2Q12772 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.25■□□□□ 0.67
SREBF2Q12772 AC004790.1-201ENST00000612686 536 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms