Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CCL20P78556 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.44□□□□□ -0.26
CCL20P78556 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL20P78556 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CCL20P78556 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 TCAF2P1-201ENST00000291129 2421 ntBASIC13.43□□□□□ -0.26
CCL20P78556 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.43□□□□□ -0.26
CCL20P78556 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.43□□□□□ -0.26
CCL20P78556 NCF1B-203ENST00000435988 1254 ntBASIC13.43□□□□□ -0.26
CCL20P78556 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.43□□□□□ -0.26
CCL20P78556 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 AL162430.1-201ENST00000480705 870 ntBASIC13.43□□□□□ -0.26
CCL20P78556 AC002558.1-201ENST00000488906 803 ntBASIC13.43□□□□□ -0.26
CCL20P78556 AC113404.2-201ENST00000507884 177 ntBASIC13.43□□□□□ -0.26
CCL20P78556 AP003041.3-201ENST00000527151 707 ntBASIC13.43□□□□□ -0.26
CCL20P78556 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCL20P78556 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 AP005117.1-202ENST00000581724 1908 ntBASIC13.43□□□□□ -0.26
CCL20P78556 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL20P78556 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL20P78556 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCL20P78556 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL20P78556 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL20P78556 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 AL353807.1-201ENST00000427475 662 ntBASIC13.42□□□□□ -0.26
CCL20P78556 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL20P78556 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 AP003097.1-201ENST00000530657 1135 ntBASIC13.42□□□□□ -0.26
CCL20P78556 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL20P78556 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.42□□□□□ -0.26
CCL20P78556 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL20P78556 AC073195.1-201ENST00000607241 877 ntBASIC13.42□□□□□ -0.26
CCL20P78556 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCL20P78556 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms