Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.09□□□□□ -0.47
PRKDCP78527 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.09□□□□□ -0.47
PRKDCP78527 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.09□□□□□ -0.47
PRKDCP78527 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 AC068587.3-201ENST00000526613 355 ntBASIC12.09□□□□□ -0.47
PRKDCP78527 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
PRKDCP78527 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.08□□□□□ -0.47
PRKDCP78527 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC12.08□□□□□ -0.47
PRKDCP78527 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.08□□□□□ -0.48
PRKDCP78527 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.08□□□□□ -0.48
PRKDCP78527 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.08□□□□□ -0.48
PRKDCP78527 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.08□□□□□ -0.48
PRKDCP78527 DUX4L45-201ENST00000566406 1057 ntBASIC12.08□□□□□ -0.48
PRKDCP78527 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.08□□□□□ -0.48
PRKDCP78527 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.08□□□□□ -0.48
PRKDCP78527 MIR7845-201ENST00000618396 99 ntBASIC12.08□□□□□ -0.48
PRKDCP78527 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.08□□□□□ -0.48
PRKDCP78527 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.08□□□□□ -0.48
PRKDCP78527 AL391069.4-201ENST00000609583 481 ntBASIC12.08□□□□□ -0.48
PRKDCP78527 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
PRKDCP78527 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PRKDCP78527 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.08□□□□□ -0.48
PRKDCP78527 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.08□□□□□ -0.48
PRKDCP78527 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PRKDCP78527 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PRKDCP78527 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.08□□□□□ -0.48
PRKDCP78527 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.08□□□□□ -0.48
PRKDCP78527 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.08□□□□□ -0.48
PRKDCP78527 AL008638.5-201ENST00000623814 1298 ntBASIC12.08□□□□□ -0.48
PRKDCP78527 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 FAM21FP-201ENST00000426241 1131 ntBASIC12.07□□□□□ -0.48
PRKDCP78527 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 MIR326-201ENST00000362220 95 ntBASIC12.07□□□□□ -0.48
PRKDCP78527 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.07□□□□□ -0.48
PRKDCP78527 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.07□□□□□ -0.48
PRKDCP78527 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.07□□□□□ -0.48
PRKDCP78527 AL365330.1-201ENST00000607459 531 ntBASIC12.07□□□□□ -0.48
PRKDCP78527 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
PRKDCP78527 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.07□□□□□ -0.48
PRKDCP78527 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
PRKDCP78527 HLA-H-201ENST00000383620 1096 ntBASIC12.07□□□□□ -0.48
PRKDCP78527 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 SLC25A24P2-201ENST00000415059 510 ntBASIC12.07□□□□□ -0.48
PRKDCP78527 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.07□□□□□ -0.48
PRKDCP78527 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.07□□□□□ -0.48
PRKDCP78527 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.07□□□□□ -0.48
PRKDCP78527 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.07□□□□□ -0.48
PRKDCP78527 MIR3619-201ENST00000579667 83 ntBASIC12.07□□□□□ -0.48
PRKDCP78527 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.07□□□□□ -0.48
PRKDCP78527 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
PRKDCP78527 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRKDCP78527 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms