Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.77□□□□□ -0.21
CX3CL1P78423 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CX3CL1P78423 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.77□□□□□ -0.21
CX3CL1P78423 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.77□□□□□ -0.21
CX3CL1P78423 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.77□□□□□ -0.21
CX3CL1P78423 MTDHP3-201ENST00000594186 672 ntBASIC13.77□□□□□ -0.21
CX3CL1P78423 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 REXO1L6P-202ENST00000619970 1078 ntBASIC13.77□□□□□ -0.21
CX3CL1P78423 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 AC116353.5-201ENST00000638148 1699 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 AC148477.5-201ENST00000625164 1645 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CX3CL1P78423 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.76□□□□□ -0.21
CX3CL1P78423 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.76□□□□□ -0.21
CX3CL1P78423 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 IFNL4P1-201ENST00000607083 540 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CX3CL1P78423 AL355877.3-201ENST00000622820 899 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 AC073592.4-201ENST00000623827 446 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 DOC2GP-204ENST00000639052 2548 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.76□□□□□ -0.21
CX3CL1P78423 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.76□□□□□ -0.21
CX3CL1P78423 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.76□□□□□ -0.21
CX3CL1P78423 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.76□□□□□ -0.21
CX3CL1P78423 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.76□□□□□ -0.21
CX3CL1P78423 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CX3CL1P78423 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.75□□□□□ -0.21
CX3CL1P78423 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.75□□□□□ -0.21
CX3CL1P78423 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.75□□□□□ -0.21
CX3CL1P78423 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.75□□□□□ -0.21
CX3CL1P78423 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 AC105020.1-201ENST00000435356 2205 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.75□□□□□ -0.21
CX3CL1P78423 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.75□□□□□ -0.21
CX3CL1P78423 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 AL356309.3-201ENST00000624132 1934 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 DUSP5P1-201ENST00000441325 1139 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 SAPCD2P3-201ENST00000455031 850 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 UNC93B7-201ENST00000509439 705 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.75□□□□□ -0.21
CX3CL1P78423 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.75□□□□□ -0.21
CX3CL1P78423 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.75□□□□□ -0.21
CX3CL1P78423 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms