Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VSX2P58304 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
VSX2P58304 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 PCDHA12-202ENST00000613593 2588 ntBASIC16.29■□□□□ 0.2
VSX2P58304 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VSX2P58304 KRT18P2-201ENST00000447938 1258 ntBASIC16.29■□□□□ 0.2
VSX2P58304 HCG4B-203ENST00000450128 991 ntBASIC16.29■□□□□ 0.2
VSX2P58304 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.29■□□□□ 0.2
VSX2P58304 SLC25A6P2-201ENST00000497974 877 ntBASIC16.29■□□□□ 0.2
VSX2P58304 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.29■□□□□ 0.2
VSX2P58304 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
VSX2P58304 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
VSX2P58304 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSX2P58304 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VSX2P58304 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VSX2P58304 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VSX2P58304 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.28■□□□□ 0.2
VSX2P58304 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 AC018845.2-201ENST00000568326 409 ntBASIC16.28■□□□□ 0.2
VSX2P58304 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.28■□□□□ 0.2
VSX2P58304 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VSX2P58304 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.28■□□□□ 0.2
VSX2P58304 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSX2P58304 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VSX2P58304 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VSX2P58304 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.27■□□□□ 0.2
VSX2P58304 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.27■□□□□ 0.2
VSX2P58304 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSX2P58304 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
VSX2P58304 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms