Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 HCG4-201ENST00000418983 998 ntBASIC12.67□□□□□ -0.38
CMC4P56277 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.67□□□□□ -0.38
CMC4P56277 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.67□□□□□ -0.38
CMC4P56277 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 AC009947.1-201ENST00000444350 727 ntBASIC12.67□□□□□ -0.38
CMC4P56277 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.67□□□□□ -0.38
CMC4P56277 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 FAM197Y3-203ENST00000618346 717 ntBASIC12.67□□□□□ -0.38
CMC4P56277 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.67□□□□□ -0.38
CMC4P56277 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 KRT8P49-201ENST00000604166 1432 ntBASIC12.67□□□□□ -0.38
CMC4P56277 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.67□□□□□ -0.38
CMC4P56277 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CMC4P56277 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CMC4P56277 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 AL353732.1-201ENST00000569618 1459 ntBASIC12.66□□□□□ -0.38
CMC4P56277 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 AC104109.2-201ENST00000602919 1418 ntBASIC12.66□□□□□ -0.38
CMC4P56277 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CMC4P56277 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 KRT18P58-201ENST00000527480 1120 ntBASIC12.66□□□□□ -0.38
CMC4P56277 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.66□□□□□ -0.38
CMC4P56277 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 AL645728.2-201ENST00000641974 660 ntBASIC12.66□□□□□ -0.38
CMC4P56277 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CMC4P56277 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 FRMD8P1-201ENST00000440433 1524 ntBASIC12.66□□□□□ -0.38
CMC4P56277 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.66□□□□□ -0.38
CMC4P56277 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CMC4P56277 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms