Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.3■□□□□ 0.04
CASP6P55212 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.3■□□□□ 0.04
CASP6P55212 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.3■□□□□ 0.04
CASP6P55212 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 AL135999.2-201ENST00000622438 1686 ntBASIC15.3■□□□□ 0.04
CASP6P55212 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.3■□□□□ 0.04
CASP6P55212 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CASP6P55212 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASP6P55212 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CASP6P55212 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CASP6P55212 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.3■□□□□ 0.04
CASP6P55212 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CASP6P55212 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.29■□□□□ 0.04
CASP6P55212 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 FLJ13224-201ENST00000313737 1514 ntBASIC15.29■□□□□ 0.04
CASP6P55212 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.29■□□□□ 0.04
CASP6P55212 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASP6P55212 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CASP6P55212 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.29■□□□□ 0.04
CASP6P55212 PMS2P4-201ENST00000412466 1052 ntBASIC15.29■□□□□ 0.04
CASP6P55212 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 COX20P2-201ENST00000452636 358 ntBASIC15.29■□□□□ 0.04
CASP6P55212 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.29■□□□□ 0.04
CASP6P55212 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.29■□□□□ 0.04
CASP6P55212 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
CASP6P55212 ACTL9-202ENST00000612068 1252 ntBASIC15.29■□□□□ 0.04
CASP6P55212 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.29■□□□□ 0.04
CASP6P55212 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.29■□□□□ 0.04
CASP6P55212 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
CASP6P55212 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASP6P55212 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASP6P55212 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.29■□□□□ 0.04
CASP6P55212 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASP6P55212 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CASP6P55212 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CASP6P55212 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CASP6P55212 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.28■□□□□ 0.04
CASP6P55212 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CASP6P55212 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.28■□□□□ 0.04
CASP6P55212 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.28■□□□□ 0.04
CASP6P55212 AL035633.1-201ENST00000406139 838 ntBASIC15.28■□□□□ 0.04
CASP6P55212 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 AL627223.1-201ENST00000416693 442 ntBASIC15.28■□□□□ 0.04
CASP6P55212 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.28■□□□□ 0.04
CASP6P55212 AC087163.2-201ENST00000457299 853 ntBASIC15.28■□□□□ 0.04
CASP6P55212 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.28■□□□□ 0.04
CASP6P55212 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.28■□□□□ 0.04
CASP6P55212 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.28■□□□□ 0.04
CASP6P55212 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASP6P55212 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.28■□□□□ 0.04
CASP6P55212 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.28■□□□□ 0.04
CASP6P55212 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CASP6P55212 AC239800.4-201ENST00000603712 296 ntBASIC15.28■□□□□ 0.04
CASP6P55212 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.28■□□□□ 0.04
CASP6P55212 AL161645.1-201ENST00000622716 1255 ntBASIC15.28■□□□□ 0.04
CASP6P55212 AC009093.7-201ENST00000623853 1223 ntBASIC15.28■□□□□ 0.04
CASP6P55212 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CASP6P55212 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CASP6P55212 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms