Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSR1P43307 AC073592.5-201ENST00000624854 528 ntBASIC18.17■□□□□ 0.5
SSR1P43307 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 AL353593.2-201ENST00000602529 1483 ntBASIC18.17■□□□□ 0.5
SSR1P43307 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSR1P43307 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 AC009336.1-201ENST00000608941 1553 ntBASIC18.17■□□□□ 0.5
SSR1P43307 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 AC003669.1-201ENST00000334569 611 ntBASIC18.16■□□□□ 0.5
SSR1P43307 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.16■□□□□ 0.5
SSR1P43307 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SSR1P43307 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 AC132938.5-201ENST00000624980 1813 ntBASIC18.16■□□□□ 0.5
SSR1P43307 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.16■□□□□ 0.5
SSR1P43307 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR1P43307 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 AL135999.2-201ENST00000622438 1686 ntBASIC18.15■□□□□ 0.5
SSR1P43307 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.15■□□□□ 0.5
SSR1P43307 SLC25A1P3-201ENST00000395415 828 ntBASIC18.15■□□□□ 0.5
SSR1P43307 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SSR1P43307 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.15■□□□□ 0.5
SSR1P43307 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.15■□□□□ 0.5
SSR1P43307 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.15■□□□□ 0.5
SSR1P43307 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.15■□□□□ 0.5
SSR1P43307 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 BNIP3P18-201ENST00000593976 575 ntBASIC18.15■□□□□ 0.5
SSR1P43307 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 AC099336.1-202ENST00000602961 463 ntBASIC18.15■□□□□ 0.5
SSR1P43307 AL445228.2-201ENST00000605589 952 ntBASIC18.15■□□□□ 0.5
SSR1P43307 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms