Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE6BP35913 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDE6BP35913 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PDE6BP35913 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 AC138969.3-201ENST00000546612 1459 ntBASIC20.78■□□□□ 0.92
PDE6BP35913 AC138932.2-201ENST00000548268 1459 ntBASIC20.78■□□□□ 0.92
PDE6BP35913 AC126755.4-201ENST00000549796 1459 ntBASIC20.78■□□□□ 0.92
PDE6BP35913 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 AC098614.1-201ENST00000368528 745 ntBASIC20.78■□□□□ 0.92
PDE6BP35913 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.78■□□□□ 0.92
PDE6BP35913 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.78■□□□□ 0.92
PDE6BP35913 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 API5-211ENST00000534695 560 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE6BP35913 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 AC140912.1-201ENST00000577171 1054 ntBASIC20.78■□□□□ 0.92
PDE6BP35913 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 LINC00895-201ENST00000629028 1637 ntBASIC20.78■□□□□ 0.92
PDE6BP35913 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6BP35913 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDE6BP35913 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PDE6BP35913 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.77■□□□□ 0.92
PDE6BP35913 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.77■□□□□ 0.92
PDE6BP35913 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PDE6BP35913 IGHV3-71-201ENST00000523324 359 ntBASIC20.77■□□□□ 0.92
PDE6BP35913 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.77■□□□□ 0.92
PDE6BP35913 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE6BP35913 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.77■□□□□ 0.92
PDE6BP35913 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 CETN4P-206ENST00000642099 2168 ntBASIC20.77■□□□□ 0.92
PDE6BP35913 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6BP35913 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
PDE6BP35913 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
PDE6BP35913 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PDE6BP35913 LINC00896-202ENST00000609602 2128 ntBASIC20.77■□□□□ 0.91
PDE6BP35913 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.77■□□□□ 0.91
PDE6BP35913 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.77■□□□□ 0.91
PDE6BP35913 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDE6BP35913 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDE6BP35913 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE6BP35913 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDE6BP35913 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.76■□□□□ 0.91
PDE6BP35913 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.76■□□□□ 0.91
PDE6BP35913 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE6BP35913 PRYP6-201ENST00000514804 343 ntBASIC20.76■□□□□ 0.91
PDE6BP35913 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.76■□□□□ 0.91
PDE6BP35913 AL844908.2-201ENST00000609461 460 ntBASIC20.76■□□□□ 0.91
PDE6BP35913 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.76■□□□□ 0.91
PDE6BP35913 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PDE6BP35913 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE6BP35913 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE6BP35913 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6BP35913 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6BP35913 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 FOXO1B-201ENST00000504678 1527 ntBASIC20.75■□□□□ 0.91
PDE6BP35913 AC133963.1-201ENST00000504166 1679 ntBASIC20.75■□□□□ 0.91
PDE6BP35913 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6BP35913 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.75■□□□□ 0.91
PDE6BP35913 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.75■□□□□ 0.91
PDE6BP35913 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6BP35913 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6BP35913 AL589739.1-201ENST00000607720 493 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms