Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NCK1P16333 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.14■□□□□ 0.18
NCK1P16333 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
NCK1P16333 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.14■□□□□ 0.17
NCK1P16333 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NCK1P16333 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NCK1P16333 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.14■□□□□ 0.17
NCK1P16333 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.14■□□□□ 0.17
NCK1P16333 RNF126P1-202ENST00000569893 925 ntBASIC16.14■□□□□ 0.17
NCK1P16333 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.14■□□□□ 0.17
NCK1P16333 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.14■□□□□ 0.17
NCK1P16333 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.14■□□□□ 0.17
NCK1P16333 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCK1P16333 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 Z83836.1-201ENST00000624605 1642 ntBASIC16.13■□□□□ 0.17
NCK1P16333 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.13■□□□□ 0.17
NCK1P16333 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.13■□□□□ 0.17
NCK1P16333 VENTXP5-201ENST00000523979 775 ntBASIC16.13■□□□□ 0.17
NCK1P16333 AC111152.3-201ENST00000569699 673 ntBASIC16.13■□□□□ 0.17
NCK1P16333 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NCK1P16333 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 AL031432.5-201ENST00000641059 760 ntBASIC16.13■□□□□ 0.17
NCK1P16333 AP006294.2-201ENST00000641667 209 ntBASIC16.13■□□□□ 0.17
NCK1P16333 GPR89P-201ENST00000407924 1495 ntBASIC16.13■□□□□ 0.17
NCK1P16333 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 AC005052.1-201ENST00000625181 2492 ntBASIC16.13■□□□□ 0.17
NCK1P16333 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms