Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 PTCHD3P3-201ENST00000403073 906 ntBASIC17.88■□□□□ 0.45
PDGFRAP16234 ELK2BP-201ENST00000415014 1224 ntBASIC17.88■□□□□ 0.45
PDGFRAP16234 AP000347.1-202ENST00000435868 847 ntBASIC17.88■□□□□ 0.45
PDGFRAP16234 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.88■□□□□ 0.45
PDGFRAP16234 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PDGFRAP16234 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
PDGFRAP16234 TERC-201ENST00000602385 541 ntBASIC17.88■□□□□ 0.45
PDGFRAP16234 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
PDGFRAP16234 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFRAP16234 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDGFRAP16234 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PDGFRAP16234 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFRAP16234 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 AL022342.1-201ENST00000400363 863 ntBASIC17.87■□□□□ 0.45
PDGFRAP16234 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.87■□□□□ 0.45
PDGFRAP16234 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFRAP16234 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFRAP16234 AC116407.3-201ENST00000623905 1129 ntBASIC17.87■□□□□ 0.45
PDGFRAP16234 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 IL9RP2-201ENST00000423948 1312 ntBASIC17.87■□□□□ 0.45
PDGFRAP16234 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFRAP16234 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFRAP16234 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFRAP16234 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PDGFRAP16234 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFRAP16234 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
PDGFRAP16234 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDGFRAP16234 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PDGFRAP16234 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDGFRAP16234 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFRAP16234 KRT18P27-201ENST00000427733 1299 ntBASIC17.86■□□□□ 0.45
PDGFRAP16234 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFRAP16234 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFRAP16234 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFRAP16234 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFRAP16234 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFRAP16234 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.86■□□□□ 0.45
PDGFRAP16234 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFRAP16234 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFRAP16234 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.86■□□□□ 0.45
PDGFRAP16234 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFRAP16234 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFRAP16234 BX640515.1-201ENST00000617215 977 ntBASIC17.86■□□□□ 0.45
PDGFRAP16234 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.86■□□□□ 0.45
PDGFRAP16234 AC008735.5-201ENST00000623544 497 ntBASIC17.86■□□□□ 0.45
PDGFRAP16234 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFRAP16234 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms